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  5. Aob_g23145

Aob_g23145 (AGO1)


Aliases : AGO1

Description : regulatory protein *(AGO7) of transacting siRNA pathway & original description: none


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Aob_g23145

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00171480 AGO7, ZIP,... Protein argonaute 7 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
AMTR_s00122p00122810 PNH, AGO10, ZLL,... Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
AT2G32940 AGO6 Argonaute family protein 0.02 OrthoFinder output from all 47 species
AT5G21030 No alias PAZ domain-containing protein / piwi domain-containing protein 0.02 OrthoFinder output from all 47 species
Adi_g004907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g33064 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 OrthoFinder output from all 47 species
Als_g06599 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58865 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Cba_g16425 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 OrthoFinder output from all 47 species
Cba_g57125 PNH, AGO10, ZLL not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g37805 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.02 OrthoFinder output from all 47 species
Ehy_g18181 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.02 OrthoFinder output from all 47 species
GSVIVT01037488001 AGO4, OCP11 Chromatin organisation.DNA methylation.canonical... 0.02 OrthoFinder output from all 47 species
MA_9991250g0010 PNH, AGO10, ZLL Protein argonaute 1A OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002271 AGO4, OCP11 siRNA-integrating factor *(AGO) & original description:... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009460 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.04 OrthoFinder output from all 47 species
Sam_g39081 No alias regulatory protein *(AGO7) of transacting siRNA pathway... 0.02 OrthoFinder output from all 47 species
Smo110151 AGO1 Chromatin organisation.DNA methylation.canonical... 0.02 OrthoFinder output from all 47 species
Solyc09g082830.4.1 PNH, AGO10, ZLL,... RIS-Complex miRNA recruiting factor (AGO1) 0.02 OrthoFinder output from all 47 species
Solyc12g006790.3.1 PNH, AGO10, ZLL,... RIS-Complex miRNA recruiting factor (AGO1) 0.02 OrthoFinder output from all 47 species
Tin_g39101 AGO1 regulatory protein *(AGO7) of transacTing siRNA pathway... 0.02 OrthoFinder output from all 47 species
Zm00001e041452_P004 AGO1, Zm00001e041452 RIS-Complex miRNA recruiting factor (AGO1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004325 ferrochelatase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003165 Piwi 799 1099
IPR014811 ArgoL1 450 498
IPR032474 Argonaute_N 305 440
IPR003100 PAZ_dom 523 628
No external refs found!