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  5. Aob_g22525

Aob_g22525


Description : component *(uS3) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001769 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001769_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g22525

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00219330 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder output from all 47 species
AMTR_s00030p00157370 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
AT5G35530 No alias Ribosomal protein S3 family protein 0.04 OrthoFinder output from all 47 species
Ala_g20217 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Als_g19714 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Aspi01Gene09649.t1 Aspi01Gene09649 component *(uS3) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ceric.12G046300.1 Ceric.12G046300 component *(uS3) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021462.41 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Cre02.g102250 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Dac_g04101 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Dac_g08554 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ehy_g13853 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01015110001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
GSVIVT01016775001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
GSVIVT01035451001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Gb_13623 No alias component RPS3 of SSU proteome 0.02 OrthoFinder output from all 47 species
Gb_26536 No alias component RPS3 of SSU proteome 0.03 OrthoFinder output from all 47 species
LOC_Os03g38000.1 LOC_Os03g38000 component RPS3 of SSU proteome 0.04 OrthoFinder output from all 47 species
Len_g08620 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Lfl_g12476 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Mp1g16730.1 No alias component RPS3 of SSU proteome 0.05 OrthoFinder output from all 47 species
Pp3c11_22640V3.1 Pp3c11_22640 Ribosomal protein S3 family protein 0.02 OrthoFinder output from all 47 species
Pp3c5_5330V3.1 Pp3c5_5330 Ribosomal protein S3 family protein 0.02 OrthoFinder output from all 47 species
Pp3c7_2620V3.1 Pp3c7_2620 Ribosomal protein S3 family protein 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0049.g013681 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g27040 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g27041 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Smo270414 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Smo270666 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Solyc07g041310.3.1 Solyc07g041310 component RPS3 of SSU proteome 0.02 OrthoFinder output from all 47 species
Solyc08g061843.1.1 Solyc08g061843 component RPS3 of SSU proteome 0.03 OrthoFinder output from all 47 species
Spa_g10670 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Spa_g21286 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Spa_g51511 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Spa_g54393 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Zm00001e021687_P001 Zm00001e021687 component RPS3 of SSU proteome 0.02 OrthoFinder output from all 47 species
Zm00001e040177_P002 Zm00001e040177 component RPS3 of SSU proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001351 Ribosomal_S3_C 165 247
IPR004044 KH_dom_type_2 79 152
No external refs found!