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  5. Aob_g22441

Aob_g22441


Description : substrate adaptor *(RAE1) of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0002069 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g22441

Target Alias Description ECC score Gene Family Method Actions
AT5G01720 No alias RNI-like superfamily protein 0.06 OrthoFinder output from all 47 species
Dde_g16820 No alias substrate adaptor *(RAE1) of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
GSVIVT01030257001 No alias F-box/LRR-repeat protein 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Pir_g39374 No alias substrate adaptor *(RAE1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Smo142102 No alias F-box/LRR-repeat protein 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo402359 No alias F-box/LRR-repeat protein 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo75506 No alias F-box/LRR-repeat protein 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Zm00001e018233_P002 Zm00001e018233 F-box/LRR-repeat protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e021050_P001 Zm00001e021050 F-box/LRR-repeat protein 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
CC GO:0070939 Dsl1/NZR complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 121 144
IPR001611 Leu-rich_rpt 146 165
IPR001611 Leu-rich_rpt 198 219
IPR001611 Leu-rich_rpt 550 572
IPR001611 Leu-rich_rpt 171 194
IPR001611 Leu-rich_rpt 397 419
IPR001611 Leu-rich_rpt 473 496
No external refs found!