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  5. Aob_g22339

Aob_g22339


Description : not classified & original description: none


Gene families : OG0000530 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000530_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g22339

Target Alias Description ECC score Gene Family Method Actions
AT2G26530 AR781 Protein of unknown function (DUF1645) 0.02 OrthoFinder output from all 47 species
Adi_g051862 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g052338 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12192 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06192.t1 Aspi01Gene06192 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene19387.t1 Aspi01Gene19387 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene24810.t1 Aspi01Gene24810 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42339.t1 Aspi01Gene42339 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g78211 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.06G065900.1 Ceric.06G065900 not classified & original description: pacid=50619764... 0.03 OrthoFinder output from all 47 species
Ceric.19G004900.1 Ceric.19G004900 not classified & original description: pacid=50575637... 0.03 OrthoFinder output from all 47 species
Dcu_g09601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07833 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10695 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15680 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g19090.1 LOC_Os03g19090 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g44920.1 LOC_Os11g44920 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g12036 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g21249 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g16062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_101436g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_70531g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_80261g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g14398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g40043 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g07876 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12361 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g16950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60262 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g108440.2.1 Solyc01g108440 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g20366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30584 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g33025 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g42381 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR012442 DUF1645_plant 230 494
No external refs found!