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  5. Aob_g22307

Aob_g22307


Description : component *(BRF) of TFIIIb transcription factor complex & original description: none


Gene families : OG0003803 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003803_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g22307
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00092300 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase III-dependent... 0.03 OrthoFinder output from all 47 species
Aev_g05480 No alias component *(BRF) of TFIIIb transcription factor complex... 0.02 OrthoFinder output from all 47 species
Ceric.35G049400.1 Ceric.35G049400 component *(BRF) of TFIIIb transcription factor complex... 0.02 OrthoFinder output from all 47 species
Dcu_g03102 No alias component *(BRF) of TFIIIb transcription factor complex... 0.04 OrthoFinder output from all 47 species
Mp1g16760.1 No alias component BRF1 of TFIIIb transcription factor complex 0.02 OrthoFinder output from all 47 species
Ore_g08617 No alias component *(BRF) of TFIIIb transcription factor complex... 0.02 OrthoFinder output from all 47 species
Pir_g46031 No alias component *(BRF) of TFIIIb transcription factor complex... 0.02 OrthoFinder output from all 47 species
Smo410325 No alias RNA biosynthesis.RNA polymerase III-dependent... 0.02 OrthoFinder output from all 47 species
Solyc01g088720.3.1 Solyc01g088720 component BRF1 of TFIIIb transcription factor complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0017025 TBP-class protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR011665 BRF1_TBP-bd_dom 615 739
IPR013150 TFIIB_cyclin 186 283
IPR013150 TFIIB_cyclin 84 173
No external refs found!