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  5. Aob_g21747

Aob_g21747 (CLPB3, CLPB-P, APG6)


Aliases : CLPB3, CLPB-P, APG6

Description : organellar chaperone *(Clp-p/Clp-m) & original description: none


Gene families : OG0000193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000193_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g21747
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00179810 CLPB4, CLPB-M,... External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
AT3G48870 HSP93-III,... Clp ATPase 0.03 OrthoFinder output from all 47 species
Als_g16086 HSP93-V, DCA1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47842 HSP93-V, DCA1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07406 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.05 OrthoFinder output from all 47 species
Aob_g11290 ATHSP101, HOT1, HSP101 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g16301 SAG15, CLPD, ERD1 chaperone component *(ClpD) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Aop_g16852 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.04 OrthoFinder output from all 47 species
Cba_g03169 HSP93-V, DCA1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05307 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20352 HSP93-V, DCA1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G041000.1 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Ceric.18G061200.1 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001416.4 CLPB3, CLPB-P, APG6 External stimuli response.temperature.Hsp... 0.01 OrthoFinder output from all 47 species
Cre43.g760497 HSP93-V, DCA1,... Chaperone protein ClpC1, chloroplastic OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g04714 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Ehy_g21280 HSP93-V, DCA1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008636001 HSP93-V, DCA1,... External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
Gb_21720 CLPB4, CLPB-M, HSP98.7 organellar chaperone (Clp-p|Clp-m) 0.03 OrthoFinder output from all 47 species
Len_g29759 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.04 OrthoFinder output from all 47 species
Len_g34142 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
MA_1160713g0010 HSP93-V, DCA1,... ATP-dependent Clp protease ATP-binding subunit ClpA... 0.04 OrthoFinder output from all 47 species
MA_178786g0010 CLPB3, CLPB-P, APG6 Chaperone protein ClpB2, chloroplastic OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
MA_229920g0010 CLPB3, CLPB-P, APG6 Chaperone protein ClpB2, chloroplastic OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_596288g0010 HSP93-V, DCA1,... Chaperone protein ClpC1, chloroplastic OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
MA_8117g0010 HSP93-V, DCA1,... ATP-dependent Clp protease ATP-binding subunit ClpA... 0.03 OrthoFinder output from all 47 species
Mp1g02560.1 HSP93-V, DCA1,... chaperone component ClpC of chloroplast Clp-type protease complex 0.02 OrthoFinder output from all 47 species
Msp_g48913 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g10414 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Ore_g29985 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Pir_g11806 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Pir_g11817 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Pir_g19845 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Pnu_g10514 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Pnu_g19463 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Sam_g16602 No alias chaperone component *(ClpC) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Sam_g19448 No alias organellar chaperone *(Clp-p/Clp-m) & original description: none 0.02 OrthoFinder output from all 47 species
Smo170696 ATHSP101, HOT1, HSP101 External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
Smo174539 CLPB3, CLPB-P, APG6 External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
Smo411118 CLPB3, CLPB-P, APG6 External stimuli response.temperature.Hsp... 0.04 OrthoFinder output from all 47 species
Smo439163 HSP93-V, DCA1,... External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
Solyc03g118340.3.1 HSP93-V, DCA1,... chaperone component ClpC of chloroplast Clp-type protease complex 0.02 OrthoFinder output from all 47 species
Tin_g10070 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Zm00001e008312_P001 HSP93-V, DCA1,... chaperone component ClpC of chloroplast Clp-type protease complex 0.04 OrthoFinder output from all 47 species
Zm00001e040778_P001 HSP93-V, DCA1,... chaperone component ClpC of chloroplast Clp-type protease complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 722 890
IPR041546 ClpA/ClpB_AAA_lid 464 566
IPR004176 Clp_R_dom 141 190
IPR004176 Clp_R_dom 220 267
IPR019489 Clp_ATPase_C 897 975
IPR003959 ATPase_AAA_core 325 457
No external refs found!