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  5. Aob_g20874

Aob_g20874


Description : E3 ubiquitin ligase *(PPRT) & original description: none


Gene families : OG0004649 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004649_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g20874

Target Alias Description ECC score Gene Family Method Actions
AT1G68820 No alias Transmembrane Fragile-X-F-associated protein 0.03 OrthoFinder output from all 47 species
Ceric.34G011400.1 Ceric.34G011400 E3 ubiquitin ligase *(PPRT) & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g31937 No alias E3 ubiquitin ligase *(PPRT) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25510 No alias E3 ubiquitin ligase *(PPRT) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GOGO:0008150 Term Name Evidence Source
CC GO:0000502 proteasome complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0019107 myristoyltransferase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0042176 regulation of protein catabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR019396 TM_Fragile-X-F-assoc 35 297
No external refs found!