Cpa|evm.model.tig00020604.12


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.Mpp10 assembly factor


Gene families : OG_01_0003625 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003625_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020604.12
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00096p00039880 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 Archaeplastida
AT5G66540 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.05 Archaeplastida
Cre08.g370601 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 Archaeplastida
GSVIVT01007723001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 Archaeplastida
Gb_37982 No alias SSU processome assembly factor (MPP10) 0.02 Archaeplastida
MA_77639g0010 No alias SSU processome assembly factor (MPP10) 0.02 Archaeplastida
Mp8g00320.1 No alias SSU processome assembly factor (MPP10) 0.05 Archaeplastida
Pp3c4_31210V3.1 No alias No annotation 0.03 Archaeplastida
Solyc03g112820.4.1 No alias SSU processome assembly factor (MPP10) 0.05 Archaeplastida
Zm00001e032203_P002 No alias SSU processome assembly factor (MPP10) 0.07 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEA Interproscan
BP GO:0006364 rRNA processing IEA Interproscan
CC GO:0034457 Mpp10 complex IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR012173 Mpp10 36 635
No external refs found!