1. Home
  2. Species
  3. Abrodictyum obscurum
  4. Sequence
  5. Aob_g18767

Aob_g18767 (LHCA5)


Aliases : LHCA5

Description : not classified & original description: none


Gene families : OG0008436 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008436_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g18767

Target Alias Description ECC score Gene Family Method Actions
Aob_g13146 LHCA5 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g16394 CAB4, LHCA4 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g41226 LHCA2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cre07.g344950 LHCA5 Photosystem I chlorophyll a/b-binding protein 5,... 0.12 OrthoFinder output from all 47 species
Cre12.g508750 LHCA2*1, LHCA6 Photosystem I chlorophyll a/b-binding protein 6,... 0.11 OrthoFinder output from all 47 species
Ppi_g04973 LHCA5 not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 51 190
No external refs found!