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  5. Aob_g18576

Aob_g18576 (AtEMF2, EMF2, VEF2, CYR1)


Aliases : AtEMF2, EMF2, VEF2, CYR1

Description : component *(EMF2/VRN2/FIS2) of PRC2 histone methylation complex & original description: none


Gene families : OG0003135 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003135_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g18576
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
AT5G51230 AtEMF2, EMF2, VEF2, CYR1 VEFS-Box of polycomb protein 0.03 OrthoFinder output from all 47 species
Ceric.35G053800.1 AtEMF2, EMF2,... component *(EMF2/VRN2/FIS2) of PRC2 histone methylation... 0.02 OrthoFinder output from all 47 species
Dac_g20608 AtEMF2, EMF2, VEF2, CYR1 component *(EMF2/VRN2/FIS2) of PRC2 histone methylation... 0.04 OrthoFinder output from all 47 species
Ore_g17343 AtEMF2, EMF2, VEF2, CYR1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g38996 No alias component *(EMF2/VRN2/FIS2) of PRC2 histone methylation... 0.03 OrthoFinder output from all 47 species
Solyc03g093640.4.1 AtEMF2, EMF2,... component EMF2|VRN2|FIS2 of VRN/FIS/EMF core complexes.... 0.04 OrthoFinder output from all 47 species
Zm00001e005699_P001 AtEMF2, EMF2,... component EMF2|VRN2|FIS2 of VRN/FIS/EMF core complexes.... 0.04 OrthoFinder output from all 47 species
Zm00001e033776_P002 AtEMF2, EMF2,... component EMF2|VRN2|FIS2 of VRN/FIS/EMF core complexes.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP HCCA
MF GO:0005049 nuclear export signal receptor activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
InterPro domains Description Start Stop
IPR019135 Polycomb_protein_VEFS-Box 681 813
No external refs found!