Aob_g18449


Description : not classified & original description: none


Gene families : OG0000596 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000596_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g18449

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00171020 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g63130,... 0.02 OrthoFinder output from all 47 species
AMTR_s00061p00171060 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g64320,... 0.02 OrthoFinder output from all 47 species
AT1G63630 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g003355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18260 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g48359 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25412 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38128 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37191 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01036253001 No alias Pentatricopeptide repeat-containing protein At1g12620... 0.04 OrthoFinder output from all 47 species
MA_33956g0010 No alias Pentatricopeptide repeat-containing protein At3g53700,... 0.03 OrthoFinder output from all 47 species
MA_6283623g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_7256709g0010 No alias Pentatricopeptide repeat-containing protein At1g05670,... 0.04 OrthoFinder output from all 47 species
Ore_g25561 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015168 No alias not classified & original description: CDS=1-606 0.02 OrthoFinder output from all 47 species
Smo121322 No alias Pentatricopeptide repeat-containing protein At1g06710,... 0.03 OrthoFinder output from all 47 species
Smo165305 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Smo74408 No alias Pentatricopeptide repeat-containing protein At1g12775,... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 257 273
IPR002885 Pentatricopeptide_repeat 43 90
IPR002885 Pentatricopeptide_repeat 4 37
IPR002885 Pentatricopeptide_repeat 101 161
IPR002885 Pentatricopeptide_repeat 171 230
No external refs found!