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  5. Aob_g18415

Aob_g18415


Description : regulatory protein *(CMU) of microtubule-dependent CSC insertion & original description: none


Gene families : OG0000703 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000703_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g18415
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AT1G27500 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g14285 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Aop_g05769 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Ehy_g13445 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
GSVIVT01019602001 No alias Protein KINESIN LIGHT CHAIN-RELATED 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os02g01960.1 LOC_Os02g01960 regulatory protein (CMU) of microtubule-dependent CSC insertion 0.02 OrthoFinder output from all 47 species
Lfl_g04984 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.02 OrthoFinder output from all 47 species
MA_10430767g0010 No alias Protein KINESIN LIGHT CHAIN-RELATED 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_50635g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_8566391g0010 No alias Protein KINESIN LIGHT CHAIN-RELATED 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ore_g35331 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.02 OrthoFinder output from all 47 species
Pir_g49664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11314 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.02 OrthoFinder output from all 47 species
Sam_g19488 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Spa_g04349 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.03 OrthoFinder output from all 47 species
Tin_g11107 No alias regulatory protein *(CMU) of microtubule-dependent CSC... 0.02 OrthoFinder output from all 47 species
Zm00001e015601_P001 Zm00001e015601 regulatory protein (CMU) of microtubule-dependent CSC insertion 0.02 OrthoFinder output from all 47 species
Zm00001e023340_P002 Zm00001e023340 regulatory protein (CMU) of microtubule-dependent CSC insertion 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR019734 TPR_repeat 268 296
No external refs found!