1. Home
  2. Species
  3. Abrodictyum obscurum
  4. Sequence
  5. Aob_g18360

Aob_g18360 (AMY3, ATAMY3)


Aliases : AMY3, ATAMY3

Description : alpha amylase & original description: none


Gene families : OG0000515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000515_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g18360

Target Alias Description ECC score Gene Family Method Actions
AT1G69830 AMY3, ATAMY3 alpha-amylase-like 3 0.03 OrthoFinder output from all 47 species
Adi_g020848 AMY1, ATAMY1 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12545 AMY1, ATAMY1 alpha amylase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g49597 AMY3, ATAMY3 alpha amylase & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g24000 AMY3, ATAMY3 alpha amylase & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g16674 AMY3, ATAMY3 alpha amylase & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g22820.1 AMY3, ATAMY3 alpha amylase 0.01 OrthoFinder output from all 47 species
Pir_g56456 AMY1, ATAMY1 alpha amylase & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006072 glycerol-3-phosphate metabolic process IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0046168 glycerol-3-phosphate catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0052646 alditol phosphate metabolic process IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR012850 A-amylase_bs_C 992 1054
IPR006047 Glyco_hydro_13_cat_dom 690 971
No external refs found!