Aob_g17529

Description : translation initiation factor *(IF-2) & original description: none

Gene families : OG0001742 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001742_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aob_g17529

Target	Alias	Description	ECC score	Gene Family Method
Aev_g02579	No alias	translation initiation factor *(IF-2) & original...	0.03	OrthoFinder output from all 47 species
Ceric.08G043600.1	Ceric.08G043600	translation initiation factor *(IF-2) & original...	0.03	OrthoFinder output from all 47 species
LOC_Os09g34010.1	LOC_Os09g34010	IF-2 translation initiation factor	0.03	OrthoFinder output from all 47 species
Len_g13777	No alias	translation initiation factor *(IF-2) & original...	0.03	OrthoFinder output from all 47 species
Ore_g09831	No alias	translation initiation factor *(IF-2) & original...	0.02	OrthoFinder output from all 47 species
Sam_g13617	No alias	translation initiation factor *(IF-2) & original...	0.03	OrthoFinder output from all 47 species
Solyc08g081900.4.1	Solyc08g081900	IF-2 translation initiation factor	0.02	OrthoFinder output from all 47 species
Tin_g07322	No alias	translation initiation factor *(IF-2) & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003682	chromatin binding	IEP	HCCA
CC	GO:0005730	nucleolus	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
MF	GO:0030515	snoRNA binding	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
MF	GO:0034511	U3 snoRNA binding	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000795	T_Tr_GTP-bd_dom	212	367
IPR023115	TIF_IF2_dom3	493	601

External Links

No external refs found!