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  5. Aob_g17502

Aob_g17502


Description : component *(NOT11) of mRNA deadenylation CCR4-NOT complex & original description: none


Gene families : OG0005591 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005591_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g17502

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00098040 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aspi01Gene41049.t1 Aspi01Gene41049 component *(NOT11) of mRNA deadenylation CCR4-NOT... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020610.97 No alias No description available 0.03 OrthoFinder output from all 47 species
Cre17.g726800 No alias No description available 0.03 OrthoFinder output from all 47 species
Dcu_g05481 No alias component *(NOT11) of mRNA deadenylation CCR4-NOT... 0.03 OrthoFinder output from all 47 species
LOC_Os12g09610.1 LOC_Os12g09610 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g05910.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0030014 CCR4-NOT complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR019312 CNOT11 302 433
No external refs found!