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  5. Aob_g17223

Aob_g17223 (KNAT3)


Aliases : KNAT3

Description : KNOX-type transcription factor & original description: none


Gene families : OG0000252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g17223
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00026p00162850 KNAT3,... RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
AT5G11060 KNAT4 KNOTTED1-like homeobox gene 4 0.03 OrthoFinder output from all 47 species
Aspi01Gene09486.t1 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene30735.t1 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene61508.t1 KNAT3, Aspi01Gene61508 KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g03970 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G064800.1 BUM1, SHL, STM,... KNOX-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.10G031700.1 KNAT3, Ceric.10G031700 KNOX-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.13G020400.1 KNAT3, Ceric.13G020400 KNOX-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g03972 BP, BP1, KNAT1 KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g23862 KNAT4 KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01009273001 BP, BP1, KNAT1 RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
GSVIVT01031241001 KNAT6, KNAT6L, KNAT6S RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
GSVIVT01035921001 KNAT3 RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
LOC_Os03g03164.2 KNAT7, IXR11,... transcription factor (KNOX) 0.03 OrthoFinder output from all 47 species
LOC_Os03g47016.1 BP, BP1, KNAT1,... transcription factor (KNOX) 0.02 OrthoFinder output from all 47 species
LOC_Os03g56140.1 BP, BP1, KNAT1,... transcription factor (KNOX) 0.02 OrthoFinder output from all 47 species
Lfl_g30292 KNAT6, KNAT6L, KNAT6S not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_3582g0010 KNAT3 transcription factor (KNOX) 0.05 OrthoFinder output from all 47 species
MA_486460g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g06929 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17670 KNAT4 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25139 KNAT3 KNOX-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g25529 BP, BP1, KNAT1 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25530 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c18_18750V3.1 Pp3c18_18750 KNOTTED1-like homeobox gene 6 0.01 OrthoFinder output from all 47 species
Pp3c19_5610V3.1 Pp3c19_5610 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c21_10320V3.1 BUM1, SHL, STM,... KNOTTED-like from Arabidopsis thaliana 2 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0250.g026749 KNAT3 not classified & original description: CDS=1-780 0.05 OrthoFinder output from all 47 species
Smo415291 BUM1, SHL, STM,... RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
Zm00001e011538_P001 BP, BP1, KNAT1,... transcription factor (KNOX) 0.05 OrthoFinder output from all 47 species
Zm00001e027562_P001 KNAT6, KNAT6L,... transcription factor (KNOX) 0.06 OrthoFinder output from all 47 species
Zm00001e029453_P001 KNAT6, KNAT6L,... transcription factor (KNOX) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
InterPro domains Description Start Stop
IPR008422 Homeobox_KN_domain 399 438
IPR005540 KNOX1 193 232
IPR005539 ELK_dom 359 380
IPR005541 KNOX2 254 301
No external refs found!