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  5. Aob_g17146

Aob_g17146 (RACK1C_AT)


Aliases : RACK1C_AT

Description : component *(RACK1) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0002231 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002231_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g17146

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000254.89 TOZ Dynein assembly factor with WDR repeat domains 1... 0.02 OrthoFinder output from all 47 species
Dde_g07514 RACK1C_AT component *(RACK1) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
MA_10435947g0010 RACK1B_AT Guanine nucleotide-binding protein subunit beta-like... 0.02 OrthoFinder output from all 47 species
Solyc03g119040.3.1 RACK1B_AT, Solyc03g119040 associated component RACK1 of SSU proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006817 phosphate ion transport IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 186 220
IPR001680 WD40_repeat 9 44
IPR001680 WD40_repeat 96 132
IPR001680 WD40_repeat 55 90
IPR001680 WD40_repeat 225 260
IPR001680 WD40_repeat 138 178
IPR001680 WD40_repeat 284 309
No external refs found!