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  5. Aob_g17131

Aob_g17131


Description : not classified & original description: none


Gene families : OG0002352 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002352_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g17131

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00265990 PQL1, PQL2,... Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.04 OrthoFinder output from all 47 species
AMTR_s00029p00134700 PSBQ-2, PSII-Q,... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00098p00154060 PQL1, PQL2,... Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.02 OrthoFinder output from all 47 species
AMTR_s00098p00157610 PSBQ-2, PSII-Q,... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.04 OrthoFinder output from all 47 species
AT4G05180 PSBQ-2, PSII-Q, PSBQ photosystem II subunit Q-2 0.07 OrthoFinder output from all 47 species
Adi_g009979 PSBQA, PSBQ-1, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.04 OrthoFinder output from all 47 species
Adi_g043833 PSBQA, PSBQ-1, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.04 OrthoFinder output from all 47 species
Aev_g03692 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.02 OrthoFinder output from all 47 species
Aev_g43790 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.02 OrthoFinder output from all 47 species
Ala_g00903 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.06 OrthoFinder output from all 47 species
Als_g02853 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.02 OrthoFinder output from all 47 species
Aob_g42251 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g09540 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene30436.t1 PSBQ-2, PSII-Q,... component *(PsbQ) of PS-II oxygen-evolving center &... 0.02 OrthoFinder output from all 47 species
Ceric.07G029100.1 PSBQ-2, PSII-Q,... component *(PsbQ) of PS-II oxygen-evolving center &... 0.06 OrthoFinder output from all 47 species
Cre08.g372450 PSBQA, PSBQ-1, PSBQ Oxygen-evolving enhancer protein 3, chloroplastic... 0.04 OrthoFinder output from all 47 species
Dac_g01297 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.05 OrthoFinder output from all 47 species
Dcu_g03585 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.02 OrthoFinder output from all 47 species
Dcu_g41298 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.06 OrthoFinder output from all 47 species
Dde_g06282 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.04 OrthoFinder output from all 47 species
Ehy_g15147 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.04 OrthoFinder output from all 47 species
GSVIVT01002809001 PSBQ-2, PSII-Q, PSBQ Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.03 OrthoFinder output from all 47 species
Gb_04734 PSBQ-2, PSII-Q, PSBQ component PsbQ of PS-II oxygen-evolving center 0.03 OrthoFinder output from all 47 species
LOC_Os07g36080.1 PSBQA, PSBQ-1,... component PsbQ of PS-II oxygen-evolving center 0.04 OrthoFinder output from all 47 species
Len_g22517 PSBQA, PSBQ-1, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.04 OrthoFinder output from all 47 species
Mp4g07510.1 No alias component PsbQ of PS-II oxygen-evolving center 0.06 OrthoFinder output from all 47 species
Msp_g48334 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.05 OrthoFinder output from all 47 species
Ore_g21011 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.03 OrthoFinder output from all 47 species
Ore_g34253 PSBQA, PSBQ-1, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.03 OrthoFinder output from all 47 species
Ppi_g11659 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012902 PSBQA, PSBQ-1, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.03 OrthoFinder output from all 47 species
Sam_g14072 No alias component *(PsbQ) of PS-II oxygen-evolving center &... 0.02 OrthoFinder output from all 47 species
Solyc02g079950.3.1 PSBQ-2, PSII-Q,... component PsbQ of PS-II oxygen-evolving center 0.03 OrthoFinder output from all 47 species
Spa_g21161 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.07 OrthoFinder output from all 47 species
Spa_g25498 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.05 OrthoFinder output from all 47 species
Spa_g56049 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.07 OrthoFinder output from all 47 species
Tin_g19213 PSBQ-2, PSII-Q, PSBQ component *(PsbQ) of PS-II oxygen-evolving center &... 0.05 OrthoFinder output from all 47 species
Zm00001e010513_P001 PSBQ-2, PSII-Q,... component PsbQ of PS-II oxygen-evolving center 0.03 OrthoFinder output from all 47 species
Zm00001e032657_P001 PQL1, PQL2,... component PnsL3/PQL2 of NDH lumen subcomplex L 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004451 isocitrate lyase activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009536 plastid IEP HCCA
MF GO:0016833 oxo-acid-lyase activity IEP HCCA
InterPro domains Description Start Stop
IPR008797 PSII_PsbQ 24 203
No external refs found!