Aob_g15979 (ATCSLD3, KJK, CSLD3)


Aliases : ATCSLD3, KJK, CSLD3

Description : mannan synthase *(CSLD) & original description: none


Gene families : OG0000089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000089_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g15979
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Adi_g034293 ATCSLD3, KJK, CSLD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g082699 ATCSLD3, KJK, CSLD3 mannan synthase *(CSLD) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g095843 ATCSLD3, KJK, CSLD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40096 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Als_g40202 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.04 OrthoFinder output from all 47 species
Als_g51753 AtCESA1, RSW1, CESA1 catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Aop_g23682 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Ehy_g26928 CESA6, PRC1, IXR2, E112 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
GSVIVT01030468001 CSLB04, ATCSLB4, ATCSLB04 Cellulose synthase-like protein H1 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Gb_39671 ATCSLD3, KJK, CSLD3 mannan synthase (CSLD) 0.02 OrthoFinder output from all 47 species
LOC_Os06g22980.1 CSLD1, ATCSLD1,... mannan synthase (CSLD) 0.02 OrthoFinder output from all 47 species
Mp5g24550.1 ATCSLD3, KJK, CSLD3 mannan synthase (CSLD) 0.03 OrthoFinder output from all 47 species
Nbi_g04994 ATCSLD3, KJK, CSLD3 mannan synthase *(CSLD) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c1_22600V3.1 ATH-A, CESA2,... Cellulose synthase family protein 0.01 OrthoFinder output from all 47 species
Solyc01g067520.3.1 ATCSLD4, CSLD4,... mannan synthase (CSLD) 0.04 OrthoFinder output from all 47 species
Solyc03g097050.3.1 ATCSLD3, KJK,... mannan synthase (CSLD) 0.03 OrthoFinder output from all 47 species
Solyc07g051820.3.1 ATCSLB03,... Cellulose synthase-like protein H1 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Solyc12g056580.2.1 ATH-A, CESA2,... catalytic component CesA of cellulose synthase complex 0.03 OrthoFinder output from all 47 species
Spa_g01345 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Spa_g09428 ATCSLD3, KJK, CSLD3 mannan synthase *(CSLD) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g16433 ATCSLD3, KJK, CSLD3 mannan synthase *(CSLD) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g38470 ATCSLD3, KJK, CSLD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g40617 ATCSLD2, CSLD2 mannan synthase *(CSLD) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0016760 cellulose synthase (UDP-forming) activity IEA Interproscan
BP GO:0030244 cellulose biosynthetic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR005150 Cellulose_synth 369 1128
No external refs found!