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  5. Aob_g15766

Aob_g15766 (CRR22)


Aliases : CRR22

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g15766

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00176600 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Aev_g02126 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15922 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02394.t1 Aspi01Gene02394 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001657.6 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre12.g483700 OSB4 Cell cycle.organelle machineries.DNA... 0.03 OrthoFinder output from all 47 species
Dcu_g06945 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g38857 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os04g35610.1 LOC_Os04g35610 RNA editing factor (SLO2) 0.03 OrthoFinder output from all 47 species
LOC_Os06g08650.1 LOC_Os06g08650 Pentatricopeptide repeat-containing protein At2g03380,... 0.03 OrthoFinder output from all 47 species
LOC_Os12g30620.1 LOC_Os12g30620 Pentatricopeptide repeat-containing protein At3g29230... 0.03 OrthoFinder output from all 47 species
Msp_g12984 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14403 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g48694 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g10372 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26217 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35307 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo11063 REME1 Pentatricopeptide repeat-containing protein At2g34400... 0.03 OrthoFinder output from all 47 species
Zm00001e003605_P001 DOT4, Zm00001e003605 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Zm00001e013166_P001 Zm00001e013166 Pentatricopeptide repeat-containing protein At4g14820... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 557 581
IPR002885 Pentatricopeptide_repeat 387 416
IPR002885 Pentatricopeptide_repeat 457 477
IPR002885 Pentatricopeptide_repeat 183 231
IPR002885 Pentatricopeptide_repeat 483 529
IPR002885 Pentatricopeptide_repeat 283 332
IPR046848 E_motif 600 662
No external refs found!