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  5. Aob_g15745

Aob_g15745 (AGL21)


Aliases : AGL21

Description : MADS/AGL-type transcription factor & original description: none


Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g15745

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00266470 SOC1, AGL20,... RNA biosynthesis.transcriptional activation.MADS box... 0.07 OrthoFinder output from all 47 species
AT1G24260 AGL9, SEP3 K-box region and MADS-box transcription factor family protein 0.02 OrthoFinder output from all 47 species
AT2G45650 AGL6 AGAMOUS-like 6 0.02 OrthoFinder output from all 47 species
AT3G02310 AGL4, SEP2 K-box region and MADS-box transcription factor family protein 0.01 OrthoFinder output from all 47 species
Ala_g07250 AGL16 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g37796 AGL2, SEP1 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16338 AGL13 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g37797 AGL16 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g23820 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.37G052700.1 AGL104, Ceric.37G052700 MADS/AGL-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dde_g09338 AGL14 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05429 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12956 AGL2, SEP1 MADS/AGL-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
MA_333471g0010 SOC1, AGL20, ATSOC1 transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Msp_g22917 ANR1, AGL44 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50341 No alias MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g15478 GL19, AGL19 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g31312 AGL2, SEP1 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
InterPro domains Description Start Stop
IPR002487 TF_Kbox 86 158
IPR002100 TF_MADSbox 10 57
No external refs found!