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  5. Aob_g15707

Aob_g15707


Description : component *(MED26) of MEDIATOR transcription co-activator complex & original description: none


Gene families : OG0000390 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000390_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g15707
Cluster HCCA: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
Adi_g052567 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g107705 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g125956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01712 No alias component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Ala_g06699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06922 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30064.t1 Aspi01Gene30064 component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Aspi01Gene36320.t1 Aspi01Gene36320 component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Cba_g32236 No alias component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Ceric.32G000300.1 Ceric.32G000300 not classified & original description: pacid=50598005... 0.03 OrthoFinder output from all 47 species
Dcu_g48948 No alias component *(MED26) of MEDIATOR transcription... 0.04 OrthoFinder output from all 47 species
Gb_25854 No alias component MED26 of MEDIATOR transcription co-activator complex 0.03 OrthoFinder output from all 47 species
LOC_Os12g06850.1 LOC_Os12g06850 Probable mediator of RNA polymerase II transcription... 0.01 OrthoFinder output from all 47 species
Ore_g17872 No alias component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Ppi_g13634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17469 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29122 No alias component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Solyc04g071520.3.1 Solyc04g071520 Probable mediator of RNA polymerase II transcription... 0.02 OrthoFinder output from all 47 species
Solyc10g078350.2.1 Solyc10g078350 component MED26 of MEDIATOR transcription co-activator complex 0.02 OrthoFinder output from all 47 species
Spa_g11231 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g50035 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e038156_P001 Zm00001e038156 component MED26 of MEDIATOR transcription co-activator complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
CC GO:0090730 Las1 complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902555 endoribonuclease complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1905348 endonuclease complex IEP HCCA
CC GO:1905354 exoribonuclease complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR017923 TFIIS_N 146 194
No external refs found!