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  5. Aob_g15568

Aob_g15568


Description : pre-60S ribosomal subunit assembly factor *(SMO4) & original description: none


Gene families : OG0004538 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004538_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g15568

Target Alias Description ECC score Gene Family Method Actions
AT2G40430 No alias CONTAINS InterPro DOMAIN/s: P60-like... 0.03 OrthoFinder output from all 47 species
Ceric.07G089700.1 Ceric.07G089700 pre-60S ribosomal subunit assembly factor *(SMO4) &... 0.05 OrthoFinder output from all 47 species
Cre07.g348250 No alias Ribosome biogenesis protein NOP53 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Ehy_g01055 No alias pre-60S ribosomal subunit assembly factor *(SMO4) &... 0.03 OrthoFinder output from all 47 species
Len_g01209 No alias pre-60S ribosomal subunit assembly factor *(SMO4) &... 0.02 OrthoFinder output from all 47 species
Msp_g11709 No alias pre-60S ribosomal subunit assembly factor *(SMO4) &... 0.03 OrthoFinder output from all 47 species
Ore_g10103 No alias pre-60S ribosomal subunit assembly factor *(SMO4) &... 0.03 OrthoFinder output from all 47 species
Zm00001e040405_P001 Zm00001e040405 pre-60S ribosomal subunit assembly factor (SMO4) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
InterPro domains Description Start Stop
IPR011687 Nop53/GLTSCR2 8 357
No external refs found!