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  5. Lfl_g22517

Lfl_g22517 (ATUBC2, UBC2)


Aliases : ATUBC2, UBC2

Description : E2 ubiquitin-conjugating enzyme *(UBC1) & original description: none


Gene families : OG0000103 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000103_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g22517
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Adi_g047476 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.01 OrthoFinder output from all 39 species
Aev_g07023 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.01 OrthoFinder output from all 39 species
GSVIVT01020056001 ATUBC2, UBC2 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 39 species
GSVIVT01022467001 ATUBC2, UBC2 Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 39 species
Len_g50508 No alias E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.02 OrthoFinder output from all 39 species
Nbi_g23818 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.01 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 8 144
No external refs found!