Description : component *(uL6) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0001493 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001493_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Lfl_g22504 | |
Cluster | HCCA: Cluster_52 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00018p00131950 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
AT1G33120 | No alias | Ribosomal protein L6 family | 0.03 | OrthoFinder output from all 47 species | |
AT1G33140 | PGY2 | Ribosomal protein L6 family | 0.04 | OrthoFinder output from all 47 species | |
Als_g37907 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g00632 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g00197 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g24600 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.1Z004300.1 | Ceric.1Z004300 | component *(uL6) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00001532.12 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
Cre12.g494050 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g00432 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g11153 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g27021 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os09g31180.1 | LOC_Os09g31180 | component RPL9 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
MA_38141g0010 | No alias | component RPL9 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
Mp4g24070.1 | No alias | component RPL9 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
Msp_g02241 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Pp3c10_8500V3.1 | Pp3c10_8500 | Ribosomal protein L6 family | 0.01 | OrthoFinder output from all 47 species | |
Pp3c14_8600V3.1 | Pp3c14_8600 | Ribosomal protein L6 family | 0.02 | OrthoFinder output from all 47 species | |
Sam_g11980 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g32375 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Smo269009 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
Solyc12g096700.2.1 | Solyc12g096700 | component RPL9 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
Spa_g22811 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g43562 | No alias | component *(uL6) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e036699_P002 | Zm00001e036699 | component RPL9 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
MF | GO:0019843 | rRNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | HCCA |
CC | GO:0005743 | mitochondrial inner membrane | IEP | HCCA |
BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
BP | GO:0006096 | glycolytic process | IEP | HCCA |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | HCCA |
MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
MF | GO:0016832 | aldehyde-lyase activity | IEP | HCCA |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
CC | GO:0019866 | organelle inner membrane | IEP | HCCA |
CC | GO:0031090 | organelle membrane | IEP | HCCA |
CC | GO:0031966 | mitochondrial membrane | IEP | HCCA |
BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
MF | GO:0051213 | dioxygenase activity | IEP | HCCA |
CC | GO:0061617 | MICOS complex | IEP | HCCA |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
CC | GO:0098798 | mitochondrial protein-containing complex | IEP | HCCA |
CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | HCCA |
No external refs found! |