Lfl_g22504


Description : component *(uL6) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001493 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001493_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g22504
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00131950 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
AT1G33120 No alias Ribosomal protein L6 family 0.03 OrthoFinder output from all 47 species
AT1G33140 PGY2 Ribosomal protein L6 family 0.04 OrthoFinder output from all 47 species
Als_g37907 No alias component *(uL6) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aob_g00632 No alias component *(uL6) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aop_g00197 No alias component *(uL6) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cba_g24600 No alias component *(uL6) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ceric.1Z004300.1 Ceric.1Z004300 component *(uL6) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001532.12 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Cre12.g494050 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Dac_g00432 No alias component *(uL6) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Dcu_g11153 No alias component *(uL6) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Dcu_g27021 No alias component *(uL6) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
LOC_Os09g31180.1 LOC_Os09g31180 component RPL9 of LSU proteome component 0.03 OrthoFinder output from all 47 species
MA_38141g0010 No alias component RPL9 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Mp4g24070.1 No alias component RPL9 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Msp_g02241 No alias component *(uL6) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pp3c10_8500V3.1 Pp3c10_8500 Ribosomal protein L6 family 0.01 OrthoFinder output from all 47 species
Pp3c14_8600V3.1 Pp3c14_8600 Ribosomal protein L6 family 0.02 OrthoFinder output from all 47 species
Sam_g11980 No alias component *(uL6) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g32375 No alias component *(uL6) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Smo269009 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Solyc12g096700.2.1 Solyc12g096700 component RPL9 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Spa_g22811 No alias component *(uL6) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Spa_g43562 No alias component *(uL6) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e036699_P002 Zm00001e036699 component RPL9 of LSU proteome component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
MF GO:0019843 rRNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
CC GO:0061617 MICOS complex IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR020040 Ribosomal_L6_a/b-dom 12 86
IPR020040 Ribosomal_L6_a/b-dom 109 177
No external refs found!