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  5. Lfl_g22489

Lfl_g22489 (RHA3A)


Aliases : RHA3A

Description : RING-H2-class ATL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g22489

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00271850 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00008p00185200 ATL6,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AMTR_s00008p00200880 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00018p00191870 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AMTR_s00044p00211560 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
AMTR_s00059p00176670 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00129p00065710 ATL2, TL2,... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AT1G20823 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G63840 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G17450 RHA3A RING-H2 finger A3A 0.03 OrthoFinder output from all 47 species
AT2G35910 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G42350 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G16720 ATL2, TL2 TOXICOS EN LEVADURA 2 0.03 OrthoFinder output from all 47 species
AT3G60966 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G33565 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G53110 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g015773 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g09630 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g13880 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aev_g15441 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aev_g39979 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aev_g40193 BRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01244 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ala_g15539 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Ala_g19891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23533 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Als_g24156 ATL5 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Als_g46662 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Als_g59747 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aop_g06652 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aop_g13710 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aop_g26561 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aop_g70816 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene12530.t1 Aspi01Gene12530 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene46827.t1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene70383.t1 Aspi01Gene70383 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70839.t1 Aspi01Gene70839 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ceric.07G057700.1 Ceric.07G057700 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Ceric.09G083100.1 Ceric.09G083100 not classified & original description: pacid=50587896... 0.03 OrthoFinder output from all 47 species
Ceric.09G083300.1 Ceric.09G083300 not classified & original description: pacid=50586861... 0.05 OrthoFinder output from all 47 species
Ceric.09G083800.1 Ceric.09G083800 not classified & original description: pacid=50587862... 0.04 OrthoFinder output from all 47 species
Ceric.15G075700.1 Ceric.15G075700 not classified & original description: pacid=50639640... 0.03 OrthoFinder output from all 47 species
Ceric.17G012000.1 Ceric.17G012000 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ceric.18G058800.1 Ceric.18G058800 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Ceric.21G001000.1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ceric.21G001100.1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.22G061300.1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.25G002800.1 Ceric.25G002800 not classified & original description: pacid=50594229... 0.03 OrthoFinder output from all 47 species
Ceric.29G079700.1 Ceric.29G079700 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dac_g05542 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dac_g07458 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dac_g22588 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Dac_g32939 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Dcu_g00960 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dcu_g12448 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Dcu_g23802 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dde_g19870 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dde_g41558 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ehy_g14073 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g27968 ATL4H RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g28199 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
GSVIVT01000538001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
GSVIVT01018343001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 OrthoFinder output from all 47 species
GSVIVT01019530001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01028306001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Gb_04642 ATL2, TL2 RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
Gb_04643 No alias RING-H2 finger protein ATL60 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_04644 ATL2, TL2 RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
Gb_04645 No alias RING-H2-class E3 ligase 0.06 OrthoFinder output from all 47 species
Gb_14778 No alias RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Gb_14788 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Gb_28973 BRH1 Probable E3 ubiquitin-protein ligase RHA1A... 0.04 OrthoFinder output from all 47 species
Gb_28980 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_32878 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Gb_40644 BRH1 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g11520.1 LOC_Os01g11520 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os01g55110.1 LOC_Os01g55110 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
LOC_Os01g64620.1 LOC_Os01g64620 RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os02g14990.1 LOC_Os02g14990 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g36330.1 LOC_Os02g36330 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
LOC_Os02g45390.1 LOC_Os02g45390 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os02g45710.1 BRH1, LOC_Os02g45710 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os02g45780.1 LOC_Os02g45780 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os03g57410.1 LOC_Os03g57410 Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os04g37740.1 ATRING1, RING1,... RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
LOC_Os04g49550.1 RHA3A, LOC_Os04g49550 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os05g29710.1 LOC_Os05g29710 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os06g09310.1 LOC_Os06g09310 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
LOC_Os06g12680.1 LOC_Os06g12680 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os06g34530.1 ATL43, LOC_Os06g34530 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g37760.1 ATL6, LOC_Os08g37760 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os08g44950.1 LOC_Os08g44950 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os11g05230.1 LOC_Os11g05230 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g42530.1 RHA3B, LOC_Os12g42530 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os12g42540.1 LOC_Os12g42540 RING-H2 finger protein ATL70 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g38931 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Lfl_g24628 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
MA_10106144g0010 ATL2, TL2 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_101154g0010 ATL2, TL2 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_10426163g0010 RHA3B no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10428061g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_105610g0010 RHA3A no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_227897g0010 ATL2, TL2 RING-H2-class E3 ligase 0.06 OrthoFinder output from all 47 species
MA_26001g0020 ATL2, TL2 RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
MA_2639751g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_308999g0010 ATL2, TL2 RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_308999g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_465316g0010 ATL2, TL2 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_80729g0030 ATL2, TL2 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
MA_85088g0010 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_904294g0010 ATL3 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Mp1g27170.1 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Msp_g12500 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Msp_g13489 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Msp_g20330 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Nbi_g07839 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Nbi_g34002 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g21782 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0188.g025158 No alias not classified & original description: CDS=1-642 0.04 OrthoFinder output from all 47 species
Sam_g28688 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Sam_g34706 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo438800 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Solyc01g066430.3.1 ATL2, TL2, Solyc01g066430 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc03g083460.3.1 Solyc03g083460 RING-H2 finger protein ATL22 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc06g053640.1.1 Solyc06g053640 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc06g064440.3.1 Solyc06g064440 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc10g011880.1.1 Solyc10g011880 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc11g073170.1.1 Solyc11g073170 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc12g055710.1.1 ATL3, Solyc12g055710 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Spa_g02204 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Spa_g20845 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g37346 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Spa_g53066 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02554 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.04 OrthoFinder output from all 47 species
Zm00001e000398_P001 Zm00001e000398 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e007129_P001 Zm00001e007129 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e007956_P001 ATRING1, RING1,... RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e014709_P001 Zm00001e014709 RING-H2-class E3 ligase 0.06 OrthoFinder output from all 47 species
Zm00001e015905_P001 ATL31, CNI1,... RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e016470_P001 Zm00001e016470 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e019779_P001 Zm00001e019779 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e023238_P001 Zm00001e023238 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e023515_P001 Zm00001e023515 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e031439_P001 Zm00001e031439 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e031874_P001 Zm00001e031874 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e034421_P001 ATL6, Zm00001e034421 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Zm00001e035560_P001 ATL3, Zm00001e035560 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e039357_P001 Zm00001e039357 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 95 138
No external refs found!