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  5. Aob_g14023

Aob_g14023 (ATGCP4, GCP4)


Aliases : ATGCP4, GCP4

Description : component *(GCP4) of gamma-Tubulin ring complex & original description: none


Gene families : OG0005059 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005059_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g14023
Cluster HCCA: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00141410 ATGCP4, GCP4,... Cytoskeleton.microtubular network.microtubule Tubulin... 0.02 OrthoFinder output from all 47 species
Ala_g23192 ATGCP4, GCP4 component *(GCP4) of gamma-Tubulin ring complex &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene58584.t1 ATGCP4, GCP4,... component *(GCP4) of gamma-Tubulin ring complex &... 0.02 OrthoFinder output from all 47 species
LOC_Os05g06260.1 ATGCP4, GCP4,... component GCP4 of gamma-Tubulin ring complex (gamma-TuRC) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043015 gamma-tubulin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR040457 GCP_C 405 735
IPR041470 GCP_N 2 400
No external refs found!