Aob_g13607 (PRPL11)


Aliases : PRPL11

Description : component *(uL11c) of large plastid ribosomal-subunit proteome & original description: none


Gene families : OG0007074 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007074_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g13607
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
AT1G32990 PRPL11 plastid ribosomal protein l11 0.12 OrthoFinder output from all 47 species
Adi_g019225 PRPL11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g24656 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ala_g12058 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Als_g00538 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Aop_g01017 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Azfi_s0591.g078746 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ceric.03G039700.1 PRPL11, Ceric.03G039700 component *(uL11c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Cre10.g423650 PRPL11 Protein biosynthesis.organelle translation... 0.06 OrthoFinder output from all 47 species
Dac_g28507 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Dde_g08872 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ehy_g02085 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
GSVIVT01019689001 PRPL11 Protein biosynthesis.organelle translation... 0.07 OrthoFinder output from all 47 species
Gb_12514 PRPL11 component psRPL11 of large ribosomal subunit proteome 0.09 OrthoFinder output from all 47 species
LOC_Os03g03020.1 PRPL11, LOC_Os03g03020 component psRPL11 of large ribosomal subunit proteome 0.1 OrthoFinder output from all 47 species
Len_g25437 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
MA_26087g0010 PRPL11 50S ribosomal protein L11, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_368887g0010 PRPL11 50S ribosomal protein L11, chloroplastic OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Mp7g12110.1 PRPL11 component psRPL11 of large ribosomal subunit proteome 0.13 OrthoFinder output from all 47 species
Nbi_g11504 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Pir_g17849 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Pp3c10_12450V3.1 PRPL11, Pp3c10_12450 plastid ribosomal protein l11 0.04 OrthoFinder output from all 47 species
Pp3c12_19370V3.1 PRPL11, Pp3c12_19370 plastid ribosomal protein l11 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0122.g021434 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Sam_g06585 No alias component *(uL11c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Solyc08g083350.4.1 PRPL11, Solyc08g083350 component psRPL11 of large ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species
Spa_g16220 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Tin_g17431 PRPL11 component *(uL11c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Zm00001e000163_P001 PRPL11, Zm00001e000163 component psRPL11 of large ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0004392 heme oxygenase (decyclizing) activity IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006788 heme oxidation IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR020784 Ribosomal_L11_N 99 156
IPR020783 Ribosomal_L11_C 161 229
No external refs found!