Aob_g12943

Description : not classified & original description: none

Gene families : OG0001784 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001784_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aob_g12943
Cluster	HCCA: Cluster_187

Target	Alias	Description	ECC score	Gene Family Method
Adi_g019357	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g089071	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g42598	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g06751	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g03876	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene62573.t2	Aspi01Gene62573	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g13830	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g05704	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Mp3g25340.1	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Msp_g48826	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g13153	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g14942	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g18063	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g08123	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g06115	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e020886_P001	Zm00001e020886	no hits & (original description: none)	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004014	adenosylmethionine decarboxylase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006576	biogenic amine metabolic process	IEP	HCCA
BP	GO:0006595	polyamine metabolic process	IEP	HCCA
BP	GO:0006596	polyamine biosynthetic process	IEP	HCCA
BP	GO:0006597	spermine biosynthetic process	IEP	HCCA
BP	GO:0006605	protein targeting	IEP	HCCA
BP	GO:0006612	protein targeting to membrane	IEP	HCCA
BP	GO:0006613	cotranslational protein targeting to membrane	IEP	HCCA
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0008215	spermine metabolic process	IEP	HCCA
BP	GO:0008216	spermidine metabolic process	IEP	HCCA
BP	GO:0008295	spermidine biosynthetic process	IEP	HCCA
MF	GO:0008312	7S RNA binding	IEP	HCCA
BP	GO:0009308	amine metabolic process	IEP	HCCA
BP	GO:0009309	amine biosynthetic process	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
BP	GO:0033365	protein localization to organelle	IEP	HCCA
BP	GO:0042401	biogenic amine biosynthetic process	IEP	HCCA
BP	GO:0045047	protein targeting to ER	IEP	HCCA
CC	GO:0048500	signal recognition particle	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
BP	GO:0051668	localization within membrane	IEP	HCCA
BP	GO:0070972	protein localization to endoplasmic reticulum	IEP	HCCA
BP	GO:0072594	establishment of protein localization to organelle	IEP	HCCA
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	IEP	HCCA
BP	GO:0072657	protein localization to membrane	IEP	HCCA
BP	GO:0090150	establishment of protein localization to membrane	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	926	974

External Links

No external refs found!

Aob_g12943

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation