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  5. Aob_g12849

Aob_g12849


Description : Trihelix-type transcription factor & original description: none


Gene families : OG0001890 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001890_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g12849
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00225900 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.Trihelix... 0.05 OrthoFinder output from all 47 species
Ehy_g19503 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01036939001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.08 OrthoFinder output from all 47 species
LOC_Os02g47370.1 LOC_Os02g47370 transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
Pnu_g31822 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo415005 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc09g005560.4.1 Solyc09g005560 transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072488 ammonium transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 153 235
No external refs found!