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  5. Aob_g12650

Aob_g12650


Description : component *(uL29) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000495 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000495_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g12650

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00034p00044200 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
AT2G39390 No alias Ribosomal L29 family protein 0.03 OrthoFinder output from all 47 species
AT3G55170 No alias Ribosomal L29 family protein 0.02 OrthoFinder output from all 47 species
Adi_g124106 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Als_g24513 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Als_g40960 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aop_g64472 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Cba_g65470 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cba_g68030 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Cre14.g617900 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Lfl_g20319 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Lfl_g31826 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
MA_10429159g0020 No alias component RPL35 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Mp6g05620.1 No alias component RPL35 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Pp3c13_5200V3.1 Pp3c13_5200 Ribosomal L29 family protein 0.02 OrthoFinder output from all 47 species
Ppi_g33963 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ppi_g60576 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Spa_g34294 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Zm00001e014607_P001 Zm00001e014607 component RPL35 of LSU proteome component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004806 triglyceride lipase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005750 mitochondrial respiratory chain complex III IEP HCCA
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0045275 respiratory chain complex III IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR001854 Ribosomal_L29/L35 10 64
No external refs found!