1. Home
  2. Species
  3. Abrodictyum obscurum
  4. Sequence
  5. Aob_g12538

Aob_g12538


Description : not classified & original description: none


Gene families : OG0000890 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000890_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g12538
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00095p00115990 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Adi_g013768 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g039630 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04881 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ala_g18840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08099 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g08441 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene07968.t1 Aspi01Gene07968 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g28864 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.03G007300.1 Ceric.03G007300 not classified & original description: pacid=50571459... 0.12 OrthoFinder output from all 47 species
Dac_g08567 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22216 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g09927 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g29117 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
GSVIVT01003617001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01025834001 No alias No description available 0.08 OrthoFinder output from all 47 species
Gb_39255 No alias Rhodanese-like domain-containing protein 6... 0.06 OrthoFinder output from all 47 species
LOC_Os04g37710.1 LOC_Os04g37710 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g48770.1 LOC_Os07g48770 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g06409 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_16583g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_2637g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g38921 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38617 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g41727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g50438 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g30907 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g40531 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Smo82287 No alias Rhodanese-like domain-containing protein 6... 0.03 OrthoFinder output from all 47 species
Solyc06g060570.3.1 Solyc06g060570 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Tin_g04919 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Tin_g32298 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Zm00001e007960_P001 Zm00001e007960 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e035911_P001 Zm00001e035911 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003855 3-dehydroquinate dehydratase activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
MF GO:0030144 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR005645 FSH_dom 5 194
No external refs found!