1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00026p00150010

AMTR_s00026p00150010 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00026.74

Description : Vesicle trafficking.target membrane tethering.TRAPP (Trafficking-Protein-Particle) complexes.TRAPP-II complex-specific components.TRS120/VAN4 component


Gene families : OG_01_0004457 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004457_tree ,
OG_02_0004070 (LandPlants) Phylogenetic Tree(s): OG_02_0004070_tree ,
OG_03_0006465 (SeedPlants) Phylogenetic Tree(s): OG_03_0006465_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00026p00150010
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
AT5G11040 TRS120, AtTRS120 TRS120 0.04 Archaeplastida
GSVIVT01035919001 No alias Vesicle trafficking.target membrane tethering.TRAPP... 0.04 Archaeplastida
LOC_Os04g42370.1 No alias component TRS120/VAN4 of TRAPP-II complex-specific components 0.03 Archaeplastida
Mp1g21550.1 No alias component TRS120/VAN4 of TRAPP-II complex-specific components 0.03 Archaeplastida
Zm00001e007655_P001 No alias component TRS120/VAN4 of TRAPP-II complex-specific components 0.04 Archaeplastida
AT5G11040 TRS120, AtTRS120 TRS120 0.04 LandPlants
GSVIVT01035919001 No alias Vesicle trafficking.target membrane tethering.TRAPP... 0.04 LandPlants
LOC_Os04g42370.1 No alias component TRS120/VAN4 of TRAPP-II complex-specific components 0.03 LandPlants
Mp1g21550.1 No alias component TRS120/VAN4 of TRAPP-II complex-specific components 0.03 LandPlants
Pp3c22_21520V3.1 No alias TRS120 0.02 LandPlants
Smo444472 No alias Vesicle trafficking.target membrane tethering.TRAPP... 0.02 LandPlants
Zm00001e007655_P001 No alias component TRS120/VAN4 of TRAPP-II complex-specific components 0.04 LandPlants
AT5G11040 TRS120, AtTRS120 TRS120 0.04 SeedPlants
GSVIVT01035919001 No alias Vesicle trafficking.target membrane tethering.TRAPP... 0.03 SeedPlants
LOC_Os04g42370.1 No alias component TRS120/VAN4 of TRAPP-II complex-specific components 0.03 SeedPlants
Zm00001e007655_P001 No alias component TRS120/VAN4 of TRAPP-II complex-specific components 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013935 TRAPP_II_complex_Trs120 1 278
IPR013935 TRAPP_II_complex_Trs120 281 1158
No external refs found!