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  5. Aob_g12470

Aob_g12470 (APUM4, PUM4)


Aliases : APUM4, PUM4

Description : not classified & original description: none


Gene families : OG0000583 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000583_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g12470

Target Alias Description ECC score Gene Family Method Actions
Adi_g025756 APUM6, PUM6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g63417 PUM3, APUM3 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g32625 PUM5, APUM5 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP HCCA
MF GO:0051743 red chlorophyll catabolite reductase activity IEP HCCA
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 858 893
IPR001313 Pumilio_RNA-bd_rpt 897 928
IPR001313 Pumilio_RNA-bd_rpt 828 853
IPR001313 Pumilio_RNA-bd_rpt 977 1006
IPR001313 Pumilio_RNA-bd_rpt 714 748
IPR001313 Pumilio_RNA-bd_rpt 752 779
IPR001313 Pumilio_RNA-bd_rpt 931 965
IPR001313 Pumilio_RNA-bd_rpt 786 818
IPR012940 NABP 624 709
IPR012940 NABP 358 615
No external refs found!