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  5. Aob_g12468

Aob_g12468


Description : helicase UAP56 & original description: none


Gene families : OG0002123 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002123_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g12468
Cluster HCCA: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
Als_g32429 No alias helicase UAP56 & original description: none 0.05 OrthoFinder output from all 47 species
Als_g52184 No alias helicase UAP56 & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene09553.t1 Aspi01Gene09553 helicase UAP56 & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28601.t1 Aspi01Gene28601 helicase UAP56 & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g19847 No alias helicase UAP56 & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g13215 No alias helicase UAP56 & original description: none 0.04 OrthoFinder output from all 47 species
Mp1g02350.1 No alias RNA helicase (Sub2). helicase component UAP56 of... 0.04 OrthoFinder output from all 47 species
Pir_g07150 No alias helicase UAP56 & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50791 No alias helicase UAP56 & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31414 No alias helicase UAP56 & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:1990380 K48-linked deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 69 234
IPR001650 Helicase_C 274 381
No external refs found!