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Aob_g12305


Description : substrate(PAL) adaptor of SCF E3 ubiquitin ligase *(SAGL1) & original description: none


Gene families : OG0000469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000469_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Aob_g12305

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00081p00156000 evm_27.TU.AmTr_v1... F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Adi_g019993 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.02 OrthoFinder output from all 47 species
Adi_g111860 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ala_g37674 No alias substrate adaptor *(SKIP6) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Als_g11274 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ceric.01G085400.1 Ceric.01G085400 substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.03 OrthoFinder output from all 47 species
Gb_06675 No alias F-box/kelch-repeat protein SKIP6 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
LOC_Os03g07160.1 LOC_Os03g07160 phenylpropanoid biosynthesis regulator (SAGL1) 0.02 OrthoFinder output from all 47 species
LOC_Os10g26990.1 LOC_Os10g26990 phenylpropanoid biosynthesis regulator (SAGL1) 0.04 OrthoFinder output from all 47 species
Lfl_g38592 SKIP6 substrate adaptor *(SKIP6) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
MA_919958g0010 SKIP6 F-box/kelch-repeat protein SKIP6 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Mp2g26320.1 No alias F-box/kelch-repeat protein At1g55270 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Pir_g12112 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Pnu_g13401 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Solyc01g022740.3.1 Solyc01g022740 phenylpropanoid biosynthesis regulator (SAGL1) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 77 114
IPR006652 Kelch_1 212 258
No external refs found!