Aob_g12298


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g12298

Target Alias Description ECC score Gene Family Method Actions
Adi_g014373 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g018506 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g102767 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02644 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05826 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07952 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19837 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g32445 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07408 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07494 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55317 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07597 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11694 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0016.g014220 No alias not classified & original description: CDS=1-2523 0.03 OrthoFinder output from all 47 species
Azfi_s0123.g048421 No alias ssDNA-binding protein *(OSB) & original description: CDS=1-2919 0.03 OrthoFinder output from all 47 species
Azfi_s0129.g048955 No alias not classified & original description: CDS=1-1935 0.03 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.02 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.03 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.02 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.03 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.03 OrthoFinder output from all 47 species
Cba_g07309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20804 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20857 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34892 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g35103 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g44526 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67208 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67241 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67908 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67915 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75111 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75380 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G085500.1 CRR22, Ceric.01G085500 not classified & original description: pacid=50592662... 0.03 OrthoFinder output from all 47 species
Ceric.02G037400.1 Ceric.02G037400 not classified & original description: pacid=50584425... 0.03 OrthoFinder output from all 47 species
Ceric.14G038700.1 Ceric.14G038700 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.21G062900.1 Ceric.21G062900 not classified & original description: pacid=50604156... 0.05 OrthoFinder output from all 47 species
Ceric.29G083700.1 Ceric.29G083700 not classified & original description: pacid=50625623... 0.04 OrthoFinder output from all 47 species
Ceric.33G035100.1 Ceric.33G035100 not classified & original description: pacid=50606945... 0.02 OrthoFinder output from all 47 species
Ceric.36G034200.1 Ceric.36G034200 not classified & original description: pacid=50568019... 0.03 OrthoFinder output from all 47 species
Ceric.37G017500.1 VAC1, ECB2,... ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.02 OrthoFinder output from all 47 species
Dac_g27795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02346 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g19723 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23952 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46473 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g01384 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g14741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33280 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g47310 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08800 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16452 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30268 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g36335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02291 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05641 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06737 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12572 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12601 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g64843 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g43486 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g49449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000758 No alias not classified & original description: CDS=443-4012 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003102 CRR22 not classified & original description: CDS=1-2616 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004387 No alias not classified & original description: CDS=1-2973 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0208.g025828 No alias not classified & original description: CDS=1-3132 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0238.g026585 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2277 0.03 OrthoFinder output from all 47 species
Sam_g07955 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17285 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18632 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27535 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30430 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39858 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54985 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56845 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g02887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28274 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g29783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 778 826
IPR002885 Pentatricopeptide_repeat 310 359
IPR002885 Pentatricopeptide_repeat 427 476
IPR002885 Pentatricopeptide_repeat 896 942
IPR002885 Pentatricopeptide_repeat 996 1044
IPR002885 Pentatricopeptide_repeat 544 592
IPR002885 Pentatricopeptide_repeat 661 708
IPR002885 Pentatricopeptide_repeat 194 240
IPR002885 Pentatricopeptide_repeat 518 538
IPR002885 Pentatricopeptide_repeat 1071 1096
IPR002885 Pentatricopeptide_repeat 868 890
No external refs found!