Aob_g12229 (ATPUB45, PUB45)


Aliases : ATPUB45, PUB45

Description : E3 ubiquitin ligase & original description: none


Gene families : OG0002832 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002832_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g12229

Target Alias Description ECC score Gene Family Method Actions
Als_g62287 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12961 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g41250.1 ATPUB45, PUB45,... U-box domain-containing protein 7 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g15193 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
MA_100380g0010 ATPUB45, PUB45 U-box domain-containing protein 6 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g08183 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0097.g019419 ATPUB45, PUB45 E3 ubiquitin ligase & original description: CDS=440-2971 0.04 OrthoFinder output from all 47 species
Sam_g16169 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g22511 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12629 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e018944_P001 ATPUB45, PUB45,... U-box domain-containing protein 45 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000225 Armadillo 594 632
IPR003613 Ubox_domain 270 340
No external refs found!