Aob_g12026

Description : component *(eL34) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0000940 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000940_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aob_g12026
Cluster	HCCA: Cluster_11

Target	Alias	Description	ECC score	Gene Family Method
AT1G26880	No alias	Ribosomal protein L34e superfamily protein	0.02	OrthoFinder output from all 47 species
Adi_g049423	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Adi_g128643	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aob_g15690	RPL34	component *(eL34) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Aop_g25989	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aop_g31513	RPL34	component *(eL34) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Azfi_s0045.g029897	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000632.3	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Cre16.g661050	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Dcu_g20175	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Dcu_g43816	RPL34	component *(eL34) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Dde_g15490	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
GSVIVT01011419001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	OrthoFinder output from all 47 species
LOC_Os08g06040.1	LOC_Os08g06040	component RPL34 of LSU proteome component	0.02	OrthoFinder output from all 47 species
LOC_Os09g24690.1	LOC_Os09g24690	component RPL34 of LSU proteome component	0.02	OrthoFinder output from all 47 species
MA_109553g0010	No alias	component RPL34 of LSU proteome component	0.02	OrthoFinder output from all 47 species
MA_175574g0010	No alias	component RPL34 of LSU proteome component	0.03	OrthoFinder output from all 47 species
MA_7581523g0010	No alias	component RPL34 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Mp4g17040.1	No alias	component RPL34 of LSU proteome component	0.04	OrthoFinder output from all 47 species
Msp_g09133	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Pir_g53253	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Pp3c11_2940V3.1	RPL34, Pp3c11_2940	Ribosomal protein L34e superfamily protein	0.01	OrthoFinder output from all 47 species
Pp3c1_1800V3.1	RPL34, Pp3c1_1800	Ribosomal protein L34e superfamily protein	0.02	OrthoFinder output from all 47 species
Pp3c25_11980V3.1	Pp3c25_11980	Ribosomal protein L34e superfamily protein	0.02	OrthoFinder output from all 47 species
Pp3c2_34570V3.1	Pp3c2_34570	Ribosomal protein L34e superfamily protein	0.02	OrthoFinder output from all 47 species
Pp3c7_21380V3.1	Pp3c7_21380	Ribosomal protein L34e superfamily protein	0.02	OrthoFinder output from all 47 species
Sam_g23757	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Sam_g44116	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
MF	GO:0003779	actin binding	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008195	Ribosomal_L34Ae	1	94

External Links

No external refs found!

Aob_g12026

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation