1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g22222

Lfl_g22222 (ATARF1, ARF1, ATARF, ATARFA1A)


Aliases : ATARF1, ARF1, ATARF, ATARFA1A

Description : ARF-GTPase *(ARF1) & original description: none


Gene families : OG0000301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g22222
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00096p00110370 ATARFA1B, ARFA1B Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
AT1G10630 ATARFA1F, ARFA1F ADP-ribosylation factor A1F 0.02 OrthoFinder output from all 47 species
AT1G23490 ATARF1, ARF1,... ADP-ribosylation factor 1 0.03 OrthoFinder output from all 47 species
AT5G17060 ATARFB1B, ARFB1B ADP-ribosylation factor B1B 0.03 OrthoFinder output from all 47 species
Adi_g009714 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g00831 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g31131 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g49446 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.25G015600.1 ATARFA1B,... ARF-GTPase *(ARF1) & original description:... 0.03 OrthoFinder output from all 47 species
Cre12.g486250 ARFA1E, ATARFA1E Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
GSVIVT01013765001 ARFA1E, ATARFA1E Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
GSVIVT01017654001 ATARFA1F, ARFA1F Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Gb_34776 ATARFA1F, ARFA1F ARF-GTPase 0.03 OrthoFinder output from all 47 species
MA_9371872g0010 ATARL1, ARF3, ARL1 ADP-ribosylation factor 1 OS=Brassica rapa subsp.... 0.02 OrthoFinder output from all 47 species
Mp2g11170.1 ATARFA1B, ARFA1B ARF-GTPase 0.03 OrthoFinder output from all 47 species
Mp2g14560.1 ATARFA1F, ARFA1F ARF-GTPase 0.03 OrthoFinder output from all 47 species
Ore_g26501 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c12_14910V3.1 ARFA1E,... ADP-ribosylation factor A1E 0.01 OrthoFinder output from all 47 species
Zm00001e009391_P001 ARF1A1C, Zm00001e009391 ARF-GTPase 0.02 OrthoFinder output from all 47 species
Zm00001e033127_P003 ARF1A1C, Zm00001e033127 ARF-GTPase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 1 159
No external refs found!