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  5. Aob_g11974

Aob_g11974 (LZF1, STH3, DBB3)


Aliases : LZF1, STH3, DBB3

Description : BBX class-IV transcription factor & original description: none


Gene families : OG0000403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000403_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g11974

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00215760 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AMTR_s00021p00250410 LZF1, STH3,... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AMTR_s00066p00204180 STO,... RNA biosynthesis.transcriptional activation.C2C2... 0.05 OrthoFinder output from all 47 species
AMTR_s00182p00043350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AT1G06040 STO B-box zinc finger family protein 0.03 OrthoFinder output from all 47 species
AT1G75540 STH2 salt tolerance homolog2 0.05 OrthoFinder output from all 47 species
AT2G31380 STH salt tolerance homologue 0.04 OrthoFinder output from all 47 species
AT2G47890 No alias B-box type zinc finger protein with CCT domain 0.05 OrthoFinder output from all 47 species
AT4G10240 No alias B-box zinc finger family protein 0.06 OrthoFinder output from all 47 species
AT4G38960 No alias B-box type zinc finger family protein 0.03 OrthoFinder output from all 47 species
AT4G39070 No alias B-box zinc finger family protein 0.03 OrthoFinder output from all 47 species
Adi_g017902 No alias BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g057497 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g081465 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g115013 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g40704 STH BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13138 STO BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36004 STO not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14676 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01696 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09321.t1 Aspi01Gene09321 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62651.t1 Aspi01Gene62651 BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene63907.t1 Aspi01Gene63907 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g009705 No alias BBX class-IV transcription factor & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0185.g056620 STO BBX class-IV transcription factor & original... 0.04 OrthoFinder output from all 47 species
Cba_g12122 No alias BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.11G021600.1 Ceric.11G021600 BBX class-IV transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.17G005800.1 STO, Ceric.17G005800 BBX class-IV transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.27G000600.1 LZF1, STH3,... BBX class-IV transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.31G000800.1 LZF1, STH3,... BBX class-IV transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g07621 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16194 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01138 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02213 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08980 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009821001 STH2 RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
LOC_Os02g39360.1 STH, LOC_Os02g39360 transcription factor (BBX-DBB) 0.05 OrthoFinder output from all 47 species
LOC_Os02g43170.1 LOC_Os02g43170 transcription factor (BBX-DBB) 0.02 OrthoFinder output from all 47 species
LOC_Os04g41560.2 STO, LOC_Os04g41560 transcription factor (BBX-DBB) 0.02 OrthoFinder output from all 47 species
LOC_Os05g11510.1 LZF1, STH3,... transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species
LOC_Os09g35880.1 LOC_Os09g35880 transcription factor (BBX-DBB) 0.04 OrthoFinder output from all 47 species
Len_g59223 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_3117g0010 STH no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g00501 No alias BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14313 STO BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g21663 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02898 No alias BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07627 No alias BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g36960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39486 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07843 No alias BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15051 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20142 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28592 STO BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12390 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32457 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018285 STO BBX class-IV transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g03827 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo102790 ATCOL4, COL4 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
Smo111647 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
Solyc01g110180.4.1 Solyc01g110180 transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species
Solyc01g110370.4.1 Solyc01g110370 transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species
Solyc02g084420.3.1 Solyc02g084420 transcription factor (BBX-DBB) 0.04 OrthoFinder output from all 47 species
Solyc06g073180.3.1 STO, Solyc06g073180 transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species
Tin_g09563 STO BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007720_P001 STO, Zm00001e007720 transcription factor (BBX-DBB) 0.05 OrthoFinder output from all 47 species
Zm00001e022915_P001 STO, Zm00001e022915 transcription factor (BBX-DBB) 0.07 OrthoFinder output from all 47 species
Zm00001e023122_P002 STH2, Zm00001e023122 transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species
Zm00001e030183_P001 Zm00001e030183 transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0047746 chlorophyllase activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000315 Znf_B-box 54 97
No external refs found!