MA_12796g0010


Description : 27.3.99 RNA.regulation of transcription.unclassified Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls. seuss (SEU)


Gene families : OG_01_0001209 (Gene family) Phylogenetic Tree(s): OG0001209_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_12796g0010
Cluster HCCA cluster: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
AT1G43850 SEU SEUSS transcriptional co-regulator 0.04 Gene family
AT4G25520 SLK1 SEUSS-like 1 0.02 Gene family
GSVIVT01010013001 No alias 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
GSVIVT01010616001 No alias 35.2 not assigned.unknown SEUSS-like 2 (SLK2) BEST... 0.05 Gene family
LOC_Os11g10070 Os11g0207100 27.3.99 RNA.regulation of transcription.unclassified... 0.03 Gene family
MA_33392g0010 No alias 35.2 not assigned.unknown SEUSS-like 2 (SLK2) BEST... 0.02 Gene family
Solyc06g059750.3.1 Solyc06g059750.3 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.04 Gene family
Solyc06g059760.3.1 Solyc06g059760.3 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
Zm00001d007295 GRMZM2G048680 27.3.99 RNA.regulation of transcription.unclassified... 0.02 Gene family
Zm00001d023706 GRMZM2G181251 27.3.99 RNA.regulation of transcription.unclassified... 0.03 Gene family
Zm00001d035990 GRMZM2G099187 35.2 not assigned.unknown SEUSS-like 2 (SLK2) BEST... 0.03 Gene family
Zm00001d049125 GRMZM2G017865 27.3.99 RNA.regulation of transcription.unclassified... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR029005 LIM-bd/SEUSS 385 636
No external refs found!