Aob_g10132

Description : not classified & original description: none

Gene families : OG0001722 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001722_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aob_g10132

Target	Alias	Description	ECC score	Gene Family Method
Adi_g087056	FTSH8	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.04	OrthoFinder output from all 47 species
Aev_g02360	FTSH8	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.05	OrthoFinder output from all 47 species
Ala_g14174	FTSH8	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.02	OrthoFinder output from all 47 species
Als_g07586	FTSH8	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.02	OrthoFinder output from all 47 species
Aop_g14163	FTSH8	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.03	OrthoFinder output from all 47 species
Aspi01Gene12384.t1	FTSH8, Aspi01Gene12384	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.04	OrthoFinder output from all 47 species
Azfi_s0022.g016135	FTSH8	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.04	OrthoFinder output from all 47 species
Cba_g13333	FTSH8	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.03	OrthoFinder output from all 47 species
Cba_g75374	VAR2, FTSH2	EXECUTER-cleavage protease *(FtsH2) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.22G054100.1	FTSH8, Ceric.22G054100	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.02	OrthoFinder output from all 47 species
Cre17.g720050	FTSH8	Protein degradation.peptidase families.metallopeptidase...	0.02	OrthoFinder output from all 47 species
Dcu_g13134	VAR2, FTSH2	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.08	OrthoFinder output from all 47 species
Dde_g23743	FTSH8	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.04	OrthoFinder output from all 47 species
Ehy_g03938	FTSH8	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.04	OrthoFinder output from all 47 species
Gb_12830	FTSH8	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.02	OrthoFinder output from all 47 species
Msp_g02086	VAR2, FTSH2	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.03	OrthoFinder output from all 47 species
Pir_g09681	FTSH8	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.04	OrthoFinder output from all 47 species
Pnu_g12324	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g01188	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008575	FTSH8	not classified & original description: CDS=1-1161	0.05	OrthoFinder output from all 47 species
Sam_g18762	No alias	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.02	OrthoFinder output from all 47 species
Sam_g37450	No alias	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.03	OrthoFinder output from all 47 species
Smo149856	VAR2, FTSH2	Protein degradation.peptidase families.metallopeptidase...	0.03	OrthoFinder output from all 47 species
Solyc07g055320.4.1	VAR2, FTSH2,...	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.03	OrthoFinder output from all 47 species
Spa_g25819	FTSH8	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.02	OrthoFinder output from all 47 species
Tin_g04117	FTSH8	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.03	OrthoFinder output from all 47 species
Tin_g28296	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	HCCA
MF	GO:0005506	iron ion binding	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
CC	GO:0019898	extrinsic component of membrane	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	361	490
IPR041569	AAA_lid_3	521	559

External Links

No external refs found!

Aob_g10132

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation