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  5. Aob_g10060

Aob_g10060


Description : alpha-class expansin & original description: none


Gene families : OG0005965 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005965_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g10060
Cluster HCCA: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
Aev_g17360 No alias alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49201 No alias alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g23182 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g16880 No alias alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61538 No alias alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g019976 No alias alpha-class expansin & original description: CDS=1-762 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g019979 No alias alpha-class expansin & original description: CDS=1-759 0.03 OrthoFinder output from all 47 species
Spa_g51230 No alias alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e004712_P001 Zm00001e004712 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!