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  5. Aob_g09620

Aob_g09620 (PRH75)


Aliases : PRH75

Description : not classified & original description: none


Gene families : OG0000466 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000466_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g09620

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00191130 PRH75,... DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
AMTR_s00092p00127820 PMH2, ATRH53,... RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
AT3G22330 PMH2, ATRH53 putative mitochondrial RNA helicase 2 0.02 OrthoFinder output from all 47 species
Ala_g14243 PRH75 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g01062 PRH75 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14234 PRH75 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g01233 PRH75 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g02044 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.02 OrthoFinder output from all 47 species
Cba_g36237 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.02 OrthoFinder output from all 47 species
Ceric.06G054800.1 emb1138, Ceric.06G054800 not classified & original description: pacid=50619432... 0.03 OrthoFinder output from all 47 species
Ceric.17G055300.1 emb1138, Ceric.17G055300 group-II intron splicing RNA helicase *(RH3) & original... 0.03 OrthoFinder output from all 47 species
Ceric.21G051700.1 emb1138, Ceric.21G051700 group-II intron splicing RNA helicase *(RH3) & original... 0.03 OrthoFinder output from all 47 species
Dac_g02286 PRH75 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10256 PRH75 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g16656 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g08659 PRH75 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15362 emb1138 group-II intron splicing RNA helicase *(PMH) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g21458 PRH75 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_10087 PMH2, ATRH53 DEAD-box ATP-dependent RNA helicase 53 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
LOC_Os12g41715.1 PMH2, ATRH53,... RNA helicase (PMH) 0.03 OrthoFinder output from all 47 species
Len_g18992 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g38604 PRH75 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_17924g0010 PRH75 DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Msp_g13082 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g28749 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.02 OrthoFinder output from all 47 species
Ore_g07399 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.04 OrthoFinder output from all 47 species
Pir_g16512 PRH75 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g32379 PRH75 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13894 PRH75 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06711 No alias group-II intron splicing RNA helicase *(RH3) & original... 0.02 OrthoFinder output from all 47 species
Solyc07g044760.3.1 PMH2, ATRH53,... RNA helicase (PMH) 0.03 OrthoFinder output from all 47 species
Spa_g06515 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.05 OrthoFinder output from all 47 species
Spa_g08414 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.04 OrthoFinder output from all 47 species
Spa_g18181 PRH75 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003219_P001 PMH2, ATRH53,... RNA helicase (PMH) 0.04 OrthoFinder output from all 47 species
Zm00001e018107_P001 PMH2, ATRH53,... RNA helicase (PMH) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005694 chromosome IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 397 494
IPR011545 DEAD/DEAH_box_helicase_dom 172 349
IPR012562 GUCT 584 682
No external refs found!