- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : OTP84
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00062590 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein DOT4,... | 0.02 | OrthoFinder output from all 47 species | |
| AT3G13770 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g080646 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g085434 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g087234 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g096184 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g101185 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g43288 | PTAC9, OSB2 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g11338 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g16835 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g17019 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g17237 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g26222 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g39266 | MEF19 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g04222 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g04438 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05049 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07351 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g09957 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g16091 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g18037 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g18621 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g18979 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30894 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g47378 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g09002 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g15360 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g26957 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g28649 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g37589 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g20705 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0005.g009229 | No alias | not classified & original description: CDS=1-2601 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0047.g030252 | No alias | not classified & original description: CDS=1-2775 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0082.g038704 | No alias | not classified & original description: CDS=1-2661 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0236.g059498 | No alias | not classified & original description: CDS=1-2331 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0280.g062299 | OSB3 | ssDNA-binding protein *(OSB) & original description: CDS=94-1002 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g04038 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05331 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g07719 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g13545 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g67649 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g72888 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G084700.1 | VAC1, ECB2,... | not classified & original description: pacid=50592179... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.11G026900.1 | Ceric.11G026900 | not classified & original description: pacid=50595788... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.25G070000.1 | VAC1, ECB2,... | not classified & original description: pacid=50593626... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.27G053200.1 | Ceric.27G053200 | not classified & original description: pacid=50604881... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.29G039600.1 | Ceric.29G039600 | not classified & original description: pacid=50625761... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.31G026600.1 | CRR22, Ceric.31G026600 | not classified & original description: pacid=50574263... | 0.02 | OrthoFinder output from all 47 species | |
| Cre12.g483700 | OSB4 | Cell cycle.organelle machineries.DNA... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g19077 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g21976 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g38506 | OSB3 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g45747 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08443 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08906 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g08927 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g17097 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g17307 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g35843 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g38672 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g43128 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g07956 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g12413 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01008721001 | No alias | Pentatricopeptide repeat-containing protein At5g40410,... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01028747001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g17978 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g21362 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g14103 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g35930 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g25431 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g26112 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g05322 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g07619 | CRR22 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g15283 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g20228 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g25097 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g38399 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g15249 | PTAC9, OSB2 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g30175 | PTAC9, OSB2 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g32143 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g43620 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g02551 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g14507 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g47301 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g48319 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g49579 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57075 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57727 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g57728 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g63642 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g63870 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g22601 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g59345 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0009.g004399 | No alias | not classified & original description: CDS=167-2908 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g51209 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo99756 | No alias | Pentatricopeptide repeat-containing protein At2g39620... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g009790.4.1 | Solyc09g009790 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g02585 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g33733 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06419 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g30433 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 146 | 193 |
| IPR002885 | Pentatricopeptide_repeat | 248 | 295 |
| IPR002885 | Pentatricopeptide_repeat | 552 | 598 |
| IPR002885 | Pentatricopeptide_repeat | 451 | 498 |
| IPR002885 | Pentatricopeptide_repeat | 350 | 396 |
| IPR046848 | E_motif | 669 | 731 |
| IPR002885 | Pentatricopeptide_repeat | 526 | 548 |
| IPR002885 | Pentatricopeptide_repeat | 425 | 449 |
| IPR002885 | Pentatricopeptide_repeat | 626 | 650 |
| No external refs found! |