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  5. Aob_g09017

Aob_g09017


Description : not classified & original description: none


Gene families : OG0000259 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g09017
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
Adi_g108794 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g63716 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25833.t1 Aspi01Gene25833 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene38522.t1 Aspi01Gene38522 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0266.g060966 No alias not classified & original description: CDS=547-2748 0.03 OrthoFinder output from all 47 species
Azfi_s0304.g063813 No alias not classified & original description: CDS=88-2331 0.04 OrthoFinder output from all 47 species
Cba_g04680 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.08G024600.1 Ceric.08G024600 not classified & original description: pacid=50638274... 0.02 OrthoFinder output from all 47 species
Dcu_g04779 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g07102 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03848 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27593 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01004516001 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01021596001 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_33037 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os07g48690.1 LOC_Os07g48690 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g13560 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007453 No alias not classified & original description: CDS=206-1297 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020758 No alias not classified & original description: CDS=148-2271 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021336 No alias not classified & original description: CDS=1-2424 0.04 OrthoFinder output from all 47 species
Smo425043 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Spa_g06690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR006868 DUF630 1 59
IPR006867 DUF632 246 544
No external refs found!