Aob_g08913 (At-SCL30A, SCL30A)

Aliases : At-SCL30A, SCL30A

Description : RNA splicing factor *(SCL28/30/33) & original description: none

Gene families : OG0001193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001193_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aob_g08913
Cluster	HCCA: Cluster_170

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cpa\|evm.model.tig00000402.16	At-SCL30A, SCL30A	RNA processing.RNA splicing.spliceosome-associated...	0.01	OrthoFinder output from all 47 species
Pir_g02221	At-SCL30A, SCL30A	RNA splicing factor *(SCL28/30/33) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0035673	oligopeptide transmembrane transporter activity	IEP	HCCA
MF	GO:0042887	amide transmembrane transporter activity	IEP	HCCA
MF	GO:1904680	peptide transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	38	108

External Links

No external refs found!