Aob_g08872 (CRR2)


Aliases : CRR2

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g08872

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272900 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
AT1G47580 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G77150 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G39952 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g002040 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g018966 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g067225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g117974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g46412 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g35743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03223 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18790 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26666 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27896 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g02684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05882 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31684 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g35120 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g45997 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43182 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07695 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04315 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05771 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16081 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17941 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19431 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21312 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21664 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25446 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26440 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g28875 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g48000 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_03545 OTP86 Pentatricopeptide repeat-containing protein At3g63370,... 0.04 OrthoFinder output from all 47 species
Len_g07899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18961 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g25856 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g26306 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44148 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_153011g0010 MEF1 RNA editing factor (MEF1) 0.02 OrthoFinder output from all 47 species
MA_59599g0010 EMB2261 Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
MA_6329g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Nbi_g42363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13583 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24177 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36708 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15468 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17205 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50367 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10359 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g24828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44072 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 147 167
IPR002885 Pentatricopeptide_repeat 72 118
IPR002885 Pentatricopeptide_repeat 273 320
IPR002885 Pentatricopeptide_repeat 172 219
No external refs found!