Aob_g08439 (LOS1)

Aliases : LOS1

Description : mRNA-translocation factor *(eEF2)) & original description: none

Gene families : OG0001393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001393_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aob_g08439
Cluster	HCCA: Cluster_166

Target	Alias	Description	ECC score	Gene Family Method
Ala_g02529	LOS1	mRNA-translocation factor *(eEF2)) & original description: none	0.02	OrthoFinder output from all 47 species
Len_g59388	LOS1	mRNA-translocation factor *(eEF2)) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g12274	LOS1	mRNA-translocation factor *(eEF2)) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g09744	LOS1	mRNA-translocation factor *(eEF2)) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g29331	LOS1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Smo411087	LOS1	Protein biosynthesis.translation elongation.eEF2...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003689	DNA clamp loader activity	IEP	HCCA
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	HCCA
CC	GO:0005663	DNA replication factor C complex	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006260	DNA replication	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	HCCA
BP	GO:0016311	dephosphorylation	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041095	EFG_II	487	549
IPR004161	EFTu-like_2	394	467
IPR000640	EFG_V-like	724	810
IPR005517	Transl_elong_EFG/EF2_IV	608	722
IPR000795	T_Tr_GTP-bd_dom	17	342

External Links

No external refs found!